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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs75447386 chr10:81739647 G/A 0.000198 490 15.93 15.9 13.5 KM Plot
THCA rs7546268 chr1:45965340 T/C 4.82E-5 490 10.6 16.07 16.97 KM Plot
THCA rs75475698 chr6:26190609 C/G 2.3E-8 489 15.48 16.8 4.75 KM Plot
THCA rs7549093 chr1:45998517 G/A 7.61E-5 485 10.6 16.18 16.97 KM Plot
THCA rs7549169 chr1:45950952 C/G 4.1E-5 490 10.4 16.07 16.92 KM Plot
THCA rs75493634 chr8:52443146 G/A 0 485 16.48 14.67 7.3 KM Plot
THCA rs7553037 chr1:41507401 G/T 3.73E-12 489 17.7 17.73 14.92 KM Plot
THCA rs75530847 chr11:62608885 A/G 7.55E-5 490 16.22 14.33 14.27 KM Plot
THCA rs75536779 chr1:18832454 T/C 8.45E-5 478 15.77 16.87 20.07 KM Plot
THCA rs755387 chr16:19352258 G/A 1.84E-5 485 16.3 14.28 12.57 KM Plot
THCA rs75546105 chr1:91820628 G/A 7.28E-6 488 15.83 16.68 17.77 KM Plot
THCA rs75555742 chr14:59752121 G/A 1.4E-8 488 16.38 12.62 5.45 KM Plot
THCA rs75561141 chr2:48079486 A/G 1.16E-7 484 15.2 18.9 8.27 KM Plot
THCA rs75603172 chr6:24427695 T/C 7.88E-15 485 16.3 14.8 11.07 KM Plot
THCA rs7562292 chr2:55230219 C/T 0.000186 483 13.23 15.97 17.78 KM Plot